Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EL161_RS07940 | Not Available | Positive | 1821509 - 1821742 | 8319.1 |
| duf4424 domain-containing protein | EL161_RS07945 | Not Available | Positive | 1821771 - 1822709 | 34883.3 |
| ligand-gated channel protein | EL161_RS07950 | Not Available | Negative | 1822767 - 1824758 | 73204.2 |
| lysr family transcriptional regulator | EL161_RS07955 | Not Available | Positive | 1824880 - 1825842 | 35003.4 |
| patatin family protein | EL161_RS07960 | Not Available | Positive | 1825922 - 1826794 | 32718.2 |
| lysr family transcriptional regulator | EL161_RS07965 | Not Available | Negative | 1826787 - 1827722 | 35941.7 |
| dmt family transporter | EL161_RS07970 | Not Available | Negative | 1827723 - 1828577 | 31246.1 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | EL161_RS07975 | Not Available | Positive | 1828775 - 1829239 | 17187.8 |
| transposase | EL161_RS07980 | Not Available | Positive | 1829335 - 1830312 | 37396.4 |
| hypothetical protein | EL161_RS07985 | Not Available | Negative | 1831479 - 1832033 | 20680.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

