Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EL161_RS00620 | Not Available | Negative | 137541 - 138761 | 43053.8 |
| biotin synthase biob | EL161_RS00625 | Not Available | Negative | 138978 - 140030 | 38734.4 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | EL161_RS00630 | Not Available | Positive | 140153 - 141511 | 49292.8 |
| nahk/ercs family hybrid sensor histidine kinase/response regulator | EL161_RS00635 | Not Available | Negative | 141530 - 144970 | 125320.0 |
| acetate--coa ligase | EL161_RS00640 | Not Available | Positive | 145146 - 147098 | 72415.1 |
| dead/deah box helicase | EL161_RS00645 | Not Available | Positive | 147325 - 149097 | 66487.8 |
| grxa family glutaredoxin | EL161_RS00650 | Not Available | Positive | 149158 - 149418 | 9808.73 |
| dcap family trimeric outer membrane transporter | EL161_RS00655 | Not Available | Negative | 149477 - 150640 | 42204.0 |
| Trna-lys | Not Available | Not Available | Positive | 150808 - 150883 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 151047 - 151122 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

