Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 1796186 - 1797728 | Not Available |
| helix-turn-helix transcriptional regulator | EL161_RS07845 | Not Available | Negative | 1798434 - 1799339 | 34023.2 |
| formate dehydrogenase accessory sulfurtransferase fdhd | EL161_RS07850 | Not Available | Negative | 1799396 - 1800292 | 32426.5 |
| duf3305 domain-containing protein | EL161_RS07855 | Not Available | Positive | 1800590 - 1801054 | 17577.1 |
| duf3306 domain-containing protein | EL161_RS07860 | Not Available | Positive | 1801054 - 1801710 | 23764.2 |
| 4fe-4s binding protein | EL161_RS07865 | Not Available | Positive | 1801897 - 1803558 | 60116.4 |
| molecular chaperone | EL161_RS07870 | Not Available | Positive | 1803569 - 1804246 | 25360.2 |
| twin-arginine translocation signal domain-containing protein | EL161_RS07875 | Not Available | Positive | 1804414 - 1804611 | 6912.11 |
| molybdopterin-dependent oxidoreductase | EL161_RS07880 | Not Available | Positive | 1804629 - 1807481 | 105809.0 |
| formate dehydrogenase fdh3 subunit beta | EL161_RS07885 | Not Available | Positive | 1807508 - 1808104 | 21573.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

