Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | EL161_RS07790 | Not Available | Negative | 1781780 - 1783147 | 49022.2 |
| argininosuccinate synthase | EL161_RS07795 | Not Available | Negative | 1783231 - 1784454 | 44524.0 |
| ornithine carbamoyltransferase | EL161_RS07800 | Not Available | Negative | 1784515 - 1785420 | 32811.5 |
| acetylglutamate kinase | EL161_RS07805 | Not Available | Negative | 1785433 - 1786215 | 26853.2 |
| n-acetyl-gamma-glutamyl-phosphate reductase | EL161_RS07810 | Not Available | Negative | 1786247 - 1787227 | 35109.1 |
| phosphoenolpyruvate carboxylase | EL161_RS07815 | Not Available | Positive | 1787893 - 1790562 | 100245.0 |
| duf1439 domain-containing protein | EL161_RS07820 | Not Available | Positive | 1790562 - 1791107 | 20195.6 |
| cina family nicotinamide mononucleotide deamidase-related protein | EL161_RS07825 | Not Available | Negative | 1791206 - 1792480 | 46278.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1792740 - 1792855 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1792986 - 1795879 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

