Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dam family site-specific dna-(adenine-n6)-methyltransferase | EL161_RS07740 | Not Available | Negative | 1770000 - 1770839 | 32229.4 |
| aaa family atpase | EL161_RS07745 | Not Available | Negative | 1770888 - 1772303 | 51745.8 |
| 3-dehydroquinate synthase | EL161_RS07750 | Not Available | Negative | 1772322 - 1773401 | 39403.7 |
| shikimate kinase arok | EL161_RS07755 | Not Available | Negative | 1773407 - 1773922 | 19189.8 |
| is200/is605 family transposase | EL161_RS07760 | Not Available | Negative | 1774142 - 1776196 | 74686.1 |
| pilus assembly protein pilp | EL161_RS07765 | Not Available | Negative | 1776218 - 1776733 | 19105.1 |
| type 4a pilus biogenesis protein pilo | EL161_RS07770 | Not Available | Negative | 1776733 - 1777359 | 23682.4 |
| piln domain-containing protein | EL161_RS07775 | Not Available | Negative | 1777356 - 1777940 | 22061.8 |
| pilus assembly protein pilm | EL161_RS07780 | Not Available | Negative | 1777928 - 1779007 | 39374.3 |
| penicillin-binding protein 1a | EL161_RS07785 | Not Available | Positive | 1779199 - 1781718 | 92582.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

