Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine-ornithine antiporter | EL161_RS07640 | Not Available | Positive | 1750190 - 1751509 | 46040.1 |
| porin | EL161_RS07645 | Not Available | Positive | 1751634 - 1752788 | 42271.8 |
| ygiq family radical sam protein | EL161_RS07650 | Not Available | Negative | 1752992 - 1755337 | 86994.0 |
| mapeg family protein | EL161_RS07655 | Not Available | Negative | 1755550 - 1755948 | 14217.9 |
| threonine/serine thre exporter family protein | EL161_RS07660 | Not Available | Positive | 1756104 - 1757324 | 44180.6 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | EL161_RS07665 | Not Available | Positive | 1757498 - 1759138 | 62461.1 |
| hypothetical protein | EL161_RS07670 | Not Available | Positive | 1759271 - 1759777 | 18184.9 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1759912 - 1760265 | Not Available |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | EL161_RS07680 | Not Available | Negative | 1760330 - 1761175 | 30454.8 |
| penicillin-binding protein activator | EL161_RS07685 | Not Available | Positive | 1761264 - 1763150 | 69191.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

