Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | EL161_RS07385 | Not Available | Positive | 1694598 - 1695677 | 40353.2 |
| dna-binding response regulator | EL161_RS07390 | Not Available | Positive | 1695677 - 1696273 | 21418.1 |
| duf1963 domain-containing protein | EL161_RS07395 | Not Available | Negative | 1696275 - 1697393 | 42680.5 |
| yifb family mg chelatase-like aaa atpase | EL161_RS07400 | Not Available | Positive | 1697610 - 1699136 | 55137.7 |
| acyltransferase | EL161_RS07405 | Not Available | Positive | 1699503 - 1700405 | 34372.4 |
| acyltransferase | EL161_RS07410 | Not Available | Positive | 1700413 - 1701354 | 35634.8 |
| duf523 domain-containing protein | EL161_RS07415 | Not Available | Negative | 1701387 - 1701860 | 16782.2 |
| gntr family transcriptional regulator | EL161_RS07420 | Not Available | Positive | 1702209 - 1702997 | 29076.8 |
| methylisocitrate lyase | EL161_RS07425 | Not Available | Positive | 1703064 - 1703942 | 31855.1 |
| 2-methylcitrate synthase | EL161_RS07430 | Not Available | Positive | 1704176 - 1705303 | 41463.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

