Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoglycoside phosphotransferase family protein | EL161_RS07335 | Not Available | Negative | 1683158 - 1684222 | 39957.1 |
| nucleotidyltransferase family protein | EL161_RS07340 | Not Available | Negative | 1684206 - 1685087 | 32079.6 |
| hypothetical protein | EL161_RS07345 | Not Available | Negative | 1685233 - 1686729 | 54228.0 |
| guanylate kinase | EL161_RS07350 | Not Available | Positive | 1687103 - 1687726 | 22977.2 |
| dna-directed rna polymerase subunit omega | EL161_RS07355 | Not Available | Positive | 1687785 - 1688063 | 10111.2 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | EL161_RS07360 | Not Available | Positive | 1688107 - 1690209 | 78603.1 |
| rida family protein | EL161_RS07365 | Not Available | Positive | 1690232 - 1690615 | 13666.5 |
| amp-binding protein | EL161_RS07370 | Not Available | Positive | 1690848 - 1692512 | 61251.7 |
| calcium/sodium antiporter | EL161_RS07375 | Not Available | Positive | 1692683 - 1693633 | 32661.2 |
| tetratricopeptide repeat protein | EL161_RS07380 | Not Available | Positive | 1693810 - 1694514 | 25001.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

