Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yicc/yloc family endoribonuclease | EL161_RS07285 | Not Available | Positive | 1671765 - 1672628 | 32988.6 |
| pyrimidine 5'-nucleotidase | EL161_RS07290 | Not Available | Negative | 1672688 - 1673404 | 26319.7 |
| lysr family transcriptional regulator | EL161_RS07295 | Not Available | Positive | 1673763 - 1674647 | 32682.7 |
| hypothetical protein | EL161_RS07300 | Not Available | Positive | 1674824 - 1675258 | 17125.0 |
| hypothetical protein | EL161_RS07305 | Not Available | Positive | 1675297 - 1675527 | 9219.55 |
| type ii restriction endonuclease | EL161_RS07310 | Not Available | Negative | 1676059 - 1677261 | 45358.9 |
| dna (cytosine-5-)-methyltransferase | EL161_RS07315 | Not Available | Positive | 1677430 - 1679091 | 63890.4 |
| fic family protein | EL161_RS07320 | Not Available | Negative | 1679380 - 1680492 | 41639.8 |
| sulfotransferase family protein | EL161_RS07325 | Not Available | Positive | 1680796 - 1681614 | 30835.7 |
| mfs transporter | EL161_RS07330 | Not Available | Negative | 1681634 - 1683058 | 53031.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

