Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l33 | EL161_RS07235 | Not Available | Negative | 1663319 - 1663492 | 6733.4 |
| 50s ribosomal protein l28 | EL161_RS07240 | Not Available | Negative | 1663499 - 1663735 | 9113.26 |
| radc family protein | EL161_RS07245 | Not Available | Negative | 1663858 - 1664535 | 24855.2 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | EL161_RS07250 | Not Available | Positive | 1664657 - 1665874 | 42811.9 |
| dutp diphosphatase | EL161_RS07255 | Not Available | Positive | 1665875 - 1666333 | 16128.5 |
| nucleoid occlusion factor slma | EL161_RS07260 | Not Available | Positive | 1666364 - 1666957 | 22705.8 |
| alpha/beta hydrolase family protein | EL161_RS07265 | Not Available | Positive | 1667093 - 1669081 | 73755.2 |
| gtp cyclohydrolase i fole | EL161_RS07270 | Not Available | Positive | 1669349 - 1669999 | 24286.5 |
| orotate phosphoribosyltransferase | EL161_RS07275 | Not Available | Negative | 1670094 - 1670741 | 23745.6 |
| ribonuclease ph | EL161_RS07280 | Not Available | Negative | 1670838 - 1671551 | 25607.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

