Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | EL161_RS07180 | Not Available | Negative | 1650292 - 1650897 | 22041.0 |
| 3-isopropylmalate dehydratase large subunit | EL161_RS07185 | Not Available | Negative | 1650922 - 1652346 | 50273.1 |
| 3-isopropylmalate dehydrogenase | EL161_RS07190 | Not Available | Negative | 1652346 - 1653440 | 39308.2 |
| 2-isopropylmalate synthase | EL161_RS07195 | Not Available | Negative | 1653492 - 1655060 | 57027.8 |
| diguanylate cyclase | EL161_RS07205 | Not Available | Positive | 1655557 - 1657344 | 67287.3 |
| dna helicase recq | EL161_RS07210 | Not Available | Negative | 1657326 - 1659149 | 68125.1 |
| thioesterase family protein | EL161_RS07215 | Not Available | Positive | 1659427 - 1659891 | 16923.5 |
| eama family transporter rard | EL161_RS07220 | Not Available | Positive | 1660108 - 1660992 | 32659.3 |
| ph domain-containing protein | EL161_RS07225 | Not Available | Negative | 1661055 - 1661573 | 19046.7 |
| amino-acid n-acetyltransferase | EL161_RS07230 | Not Available | Negative | 1661677 - 1662996 | 48264.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

