Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | EL161_RS07130 | Not Available | Negative | 1638962 - 1640443 | 53692.2 |
| peptidoglycan d,d-transpeptidase ftsi family protein | EL161_RS07135 | Not Available | Negative | 1640440 - 1642191 | 63747.6 |
| cell division protein ftsl | EL161_RS07140 | Not Available | Negative | 1642205 - 1642519 | 12162.8 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | EL161_RS07145 | Not Available | Negative | 1642532 - 1643473 | 35137.9 |
| division/cell wall cluster transcriptional repressor mraz | EL161_RS07150 | Not Available | Negative | 1643504 - 1643962 | 17697.4 |
| pepsy domain-containing protein | EL161_RS07155 | Not Available | Positive | 1644480 - 1645184 | 26780.4 |
| pepsy domain-containing protein | EL161_RS07160 | Not Available | Positive | 1645181 - 1646260 | 39772.9 |
| hypothetical protein | EL161_RS07165 | Not Available | Positive | 1646356 - 1646676 | 11618.7 |
| glycerol kinase glpk | EL161_RS07170 | Not Available | Negative | 1646745 - 1648229 | 53895.2 |
| outer membrane protein transport protein | EL161_RS07175 | Not Available | Negative | 1648418 - 1649764 | 48164.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

