Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 1616697 - 1616812 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 1616847 - 1616922 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1616956 - 1617071 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1617200 - 1620093 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1620363 - 1620438 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 1620484 - 1620560 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1620631 - 1622173 | Not Available |
| preprotein translocase subunit seca | EL161_RS07065 | Not Available | Negative | 1622809 - 1625535 | 102699.0 |
| m23 family metallopeptidase | EL161_RS07070 | Not Available | Negative | 1625596 - 1626495 | 32790.0 |
| duf721 domain-containing protein | EL161_RS07075 | Not Available | Positive | 1626523 - 1626969 | 16093.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

