Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase subunit tata | EL161_RS06980 | Not Available | Positive | 1604686 - 1604943 | 8986.82 |
| sec-independent protein translocase protein tatb | EL161_RS06985 | Not Available | Positive | 1604950 - 1605393 | 15889.8 |
| twin-arginine translocase subunit tatc | EL161_RS06990 | Not Available | Positive | 1605397 - 1606146 | 27776.3 |
| hypothetical protein | EL161_RS06995 | Not Available | Positive | 1606191 - 1606721 | 18829.7 |
| tatd family hydrolase | EL161_RS07000 | Not Available | Positive | 1606721 - 1607524 | 29733.6 |
| diguanylate cyclase | EL161_RS07005 | Not Available | Positive | 1607517 - 1609394 | 70131.7 |
| porphobilinogen synthase | EL161_RS07010 | Not Available | Positive | 1609404 - 1610414 | 37144.9 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1610637 - 1610752 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1610881 - 1613774 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1614132 - 1615674 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

