Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | EL161_RS06930 | Not Available | Positive | 1594758 - 1595369 | 22556.4 |
| thioesterase | EL161_RS06935 | Not Available | Negative | 1595406 - 1597001 | 58460.0 |
| mj1255/vc2487 family glycosyltransferase | EL161_RS06940 | Not Available | Negative | 1597142 - 1598182 | 38536.3 |
| phosphatase pap2 family protein | EL161_RS06945 | Not Available | Negative | 1598256 - 1598768 | 18519.9 |
| ygjv family protein | EL161_RS06950 | Not Available | Negative | 1599123 - 1599371 | 9235.69 |
| ribonuclease e activity regulator rraa | EL161_RS06955 | Not Available | Positive | 1599695 - 1600180 | 17047.0 |
| formimidoylglutamase | EL161_RS06960 | Not Available | Positive | 1600311 - 1601363 | 37513.5 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | EL161_RS06965 | Not Available | Positive | 1601605 - 1602360 | 28092.9 |
| scp2 domain-containing protein | EL161_RS06970 | Not Available | Positive | 1602360 - 1602980 | 23558.4 |
| ubiquinone biosynthesis regulatory protein kinase ubib | EL161_RS06975 | Not Available | Positive | 1602977 - 1604626 | 63276.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

