Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | EL161_RS06880 | Not Available | Negative | 1582792 - 1584081 | 47090.1 |
| dtdp-4-dehydrorhamnose reductase family protein | EL161_RS06885 | Not Available | Negative | 1584074 - 1585003 | 33286.7 |
| alkaline phosphatase d family protein | EL161_RS06890 | Not Available | Positive | 1585184 - 1587031 | 69923.0 |
| hypothetical protein | EL161_RS06895 | Not Available | Negative | 1587033 - 1587395 | 12884.3 |
| pseudouridine synthase | EL161_RS06900 | Not Available | Negative | 1587512 - 1588459 | 35747.2 |
| lon peptidase substrate-binding domain-containing protein | EL161_RS06905 | Not Available | Negative | 1588512 - 1589087 | 21950.6 |
| alpha/beta hydrolase | EL161_RS06910 | Not Available | Negative | 1589231 - 1590286 | 38964.7 |
| is200/is605 family transposase | EL161_RS06915 | Not Available | Positive | 1590594 - 1592932 | 81083.5 |
| yhch/yjgk/yial family protein | EL161_RS06920 | Not Available | Positive | 1593061 - 1593522 | 17281.4 |
| manganese-dependent inorganic pyrophosphatase | EL161_RS06925 | Not Available | Positive | 1593666 - 1594586 | 33383.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

