Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nfed family protein | EL161_RS06735 | Not Available | Negative | 1554583 - 1555053 | 16679.5 |
| outer membrane protein ompk | EL161_RS06740 | Not Available | Positive | 1555541 - 1556293 | 28061.8 |
| uridine phosphorylase | EL161_RS06745 | Not Available | Negative | 1556387 - 1557163 | 27517.1 |
| ydch family protein | EL161_RS06750 | Not Available | Positive | 1557558 - 1557770 | 8498.14 |
| type iii plp-dependent enzyme | EL161_RS06755 | Not Available | Negative | 1557830 - 1559005 | 43976.3 |
| hypothetical protein | EL161_RS06760 | Not Available | Negative | 1559434 - 1559913 | 17431.3 |
| mechanosensitive ion channel family protein | EL161_RS06765 | Not Available | Positive | 1560082 - 1560918 | 30288.2 |
| tetratricopeptide repeat protein | EL161_RS06770 | Not Available | Positive | 1561036 - 1562574 | 58569.8 |
| lysr family transcriptional regulator | EL161_RS06775 | Not Available | Negative | 1562638 - 1563477 | 31215.9 |
| sdr family oxidoreductase | EL161_RS06780 | Not Available | Positive | 1563639 - 1564370 | 25799.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

