Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase e specificity factor csrd | EL161_RS06685 | Not Available | Negative | 1541685 - 1543595 | 73134.8 |
| malic enzyme-like nad(p)-binding protein | EL161_RS06690 | Not Available | Negative | 1543811 - 1545055 | 44153.1 |
| 50s ribosomal protein l31 | EL161_RS06695 | Not Available | Negative | 1545567 - 1545779 | 7554.23 |
| fimv/hubp family polar landmark protein | EL161_RS06700 | Not Available | Negative | 1545945 - 1547099 | 40905.1 |
| primosomal protein n' | EL161_RS06705 | Not Available | Positive | 1547203 - 1549413 | 82678.2 |
| arginine--trna ligase | EL161_RS06710 | Not Available | Positive | 1549525 - 1551270 | 64887.4 |
| spor domain-containing protein | EL161_RS06715 | Not Available | Positive | 1551274 - 1551969 | 25988.3 |
| hypothetical protein | EL161_RS06720 | Not Available | Positive | 1552272 - 1552496 | 8494.13 |
| spfh domain-containing protein | EL161_RS06725 | Not Available | Negative | 1552704 - 1553636 | 34769.8 |
| spfh domain-containing protein | EL161_RS06730 | Not Available | Negative | 1553636 - 1554571 | 35008.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

