Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mrec | EL161_RS06585 | Not Available | Negative | 1520673 - 1521728 | 37635.8 |
| rod shape-determining protein | EL161_RS06590 | Not Available | Negative | 1521773 - 1522822 | 37247.9 |
| duf6701 domain-containing protein | EL161_RS06595 | Not Available | Negative | 1523169 - 1526849 | 130914.0 |
| msha biogenesis protein mshp | EL161_RS06600 | Not Available | Negative | 1526869 - 1527327 | 16063.1 |
| pilw family protein | EL161_RS06605 | Not Available | Negative | 1527317 - 1528180 | 31347.5 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EL161_RS06610 | Not Available | Negative | 1528180 - 1528734 | 19842.7 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EL161_RS06615 | Not Available | Negative | 1528724 - 1529212 | 17582.9 |
| tfp pilus assembly protein fimt/fimu | EL161_RS06620 | Not Available | Negative | 1529731 - 1530249 | 17864.3 |
| type ii secretion system protein | EL161_RS06625 | Not Available | Negative | 1530264 - 1530779 | 18111.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EL161_RS06630 | Not Available | Negative | 1530835 - 1531452 | 21336.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

