Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EL161_RS06535 | Not Available | Negative | 1506409 - 1507560 | 42075.3 |
| abc transporter permease | EL161_RS06540 | Not Available | Negative | 1507562 - 1508776 | 45137.2 |
| hlyd family secretion protein | EL161_RS06545 | Not Available | Negative | 1508875 - 1509849 | 35255.2 |
| tolc family protein | EL161_RS06550 | Not Available | Negative | 1509839 - 1511260 | 51744.9 |
| metalloprotease tldd | EL161_RS06555 | Not Available | Negative | 1511371 - 1512819 | 51042.9 |
| carbon-nitrogen hydrolase family protein | EL161_RS06560 | Not Available | Negative | 1512929 - 1513777 | 31260.2 |
| yhdp family protein | EL161_RS06565 | Not Available | Negative | 1513701 - 1517954 | 155789.0 |
| ribonuclease g | EL161_RS06570 | Not Available | Negative | 1517954 - 1519420 | 54855.1 |
| maf family protein | EL161_RS06575 | Not Available | Negative | 1519598 - 1520182 | 20771.1 |
| rod shape-determining protein mred | EL161_RS06580 | Not Available | Negative | 1520185 - 1520673 | 19072.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

