Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m28 family peptidase | EL161_RS06325 | Not Available | Positive | 1458519 - 1459559 | 38615.1 |
| dead/deah box helicase | EL161_RS06330 | Not Available | Positive | 1459757 - 1461616 | 68857.8 |
| hypothetical protein | EL161_RS06335 | Not Available | Positive | 1461782 - 1462150 | 13317.5 |
| had family hydrolase | EL161_RS06340 | Not Available | Negative | 1462185 - 1462817 | 23393.2 |
| dmt family transporter | EL161_RS06345 | Not Available | Negative | 1462826 - 1463815 | 36502.1 |
| hydratase | EL161_RS06350 | Not Available | Positive | 1464135 - 1464944 | 29040.3 |
| energy transducer tonb | EL161_RS06355 | Not Available | Positive | 1465102 - 1466211 | 41286.7 |
| cysteine-rich cwc family protein | EL161_RS06360 | Not Available | Negative | 1466219 - 1466575 | 12304.8 |
| hypothetical protein | EL161_RS06365 | Not Available | Negative | 1466891 - 1467469 | 21918.4 |
| hypothetical protein | EL161_RS06370 | Not Available | Negative | 1467558 - 1468010 | 16380.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

