Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EL161_RS22635 | Not Available | Negative | 1445450 - 1445572 | 4045.98 |
| is66 family transposase | EL161_RS06280 | Not Available | Negative | 1446206 - 1447708 | 56033.1 |
| is66 family insertion sequence element accessory protein tnpb | EL161_RS06285 | Not Available | Negative | 1447795 - 1448139 | 13155.0 |
| is66 family insertion sequence element accessory protein tnpa | EL161_RS06290 | Not Available | Negative | 1448136 - 1448435 | 11455.5 |
| m16 family metallopeptidase | EL161_RS06295 | Not Available | Negative | 1448605 - 1451436 | 104737.0 |
| hypothetical protein | EL161_RS06300 | Not Available | Negative | 1451726 - 1452319 | 23213.2 |
| single-stranded dna-binding protein | EL161_RS06305 | Not Available | Negative | 1452541 - 1453248 | 25602.4 |
| mfs transporter | EL161_RS06310 | Not Available | Negative | 1453356 - 1454723 | 48274.2 |
| excinuclease abc subunit uvra | EL161_RS06315 | Not Available | Positive | 1455133 - 1457985 | 105025.0 |
| hypothetical protein | EL161_RS06320 | Not Available | Positive | 1458094 - 1458435 | 12058.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

