Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1566 domain-containing protein | EL161_RS05985 | Not Available | Negative | 1367662 - 1368396 | 26908.3 |
| hypothetical protein | EL161_RS05990 | Not Available | Negative | 1368496 - 1369305 | 30308.2 |
| lyse family translocator | EL161_RS05995 | Not Available | Negative | 1369439 - 1370143 | 24613.1 |
| arac family transcriptional regulator | EL161_RS06000 | Not Available | Negative | 1370235 - 1371065 | 31801.2 |
| hypothetical protein | EL161_RS06005 | Not Available | Negative | 1371219 - 1371965 | 27419.2 |
| alkaline phosphatase | EL161_RS06010 | Not Available | Negative | 1372074 - 1373714 | 57329.1 |
| alkaline phosphatase | EL161_RS06015 | Not Available | Negative | 1373757 - 1375253 | 52822.1 |
| tonb-dependent receptor | EL161_RS06020 | Not Available | Negative | 1375489 - 1377570 | 77197.1 |
| substrate-binding periplasmic protein | EL161_RS06025 | Not Available | Positive | 1377884 - 1378714 | 31639.9 |
| sensor domain-containing diguanylate cyclase | EL161_RS06030 | Not Available | Positive | 1378960 - 1380951 | 74526.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

