Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eve domain-containing protein | EL161_RS00420 | Not Available | Positive | 87901 - 88362 | 17747.3 |
| hypothetical protein | EL161_RS00425 | Not Available | Positive | 88443 - 88775 | 12274.1 |
| tigr00266 family protein | EL161_RS00430 | Not Available | Negative | 88842 - 89636 | 28280.1 |
| lysr family transcriptional regulator | EL161_RS00435 | Not Available | Negative | 89798 - 90712 | 34226.4 |
| homogentisate 1,2-dioxygenase | EL161_RS00440 | Not Available | Positive | 90927 - 92087 | 44861.6 |
| 4-hydroxyphenylpyruvate dioxygenase | EL161_RS00445 | Not Available | Positive | 92201 - 93241 | 39215.2 |
| sensor domain-containing diguanylate cyclase | EL161_RS00450 | Not Available | Negative | 93422 - 94825 | 51533.8 |
| sugar o-acetyltransferase | EL161_RS00455 | Not Available | Negative | 95007 - 95570 | 20429.6 |
| lyse family translocator | EL161_RS00460 | Not Available | Positive | 95895 - 96518 | 22618.5 |
| gnat family n-acetyltransferase | EL161_RS00465 | Not Available | Negative | 96631 - 97896 | 47889.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

