Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | EL161_RS05680 | Not Available | Positive | 1307268 - 1308182 | 33569.0 |
| cupin domain-containing protein | EL161_RS05685 | Not Available | Negative | 1308277 - 1308759 | 18276.6 |
| tonb-dependent receptor domain-containing protein | EL161_RS05690 | Not Available | Positive | 1308898 - 1311066 | 79982.8 |
| tlpa family protein disulfide reductase | EL161_RS05695 | Not Available | Positive | 1311066 - 1311527 | 16992.1 |
| ggdef domain-containing protein | EL161_RS05700 | Not Available | Positive | 1311824 - 1312732 | 33991.5 |
| osmc domain/ycao domain-containing protein | EL161_RS05705 | Not Available | Negative | 1312816 - 1315002 | 81899.9 |
| hypothetical protein | EL161_RS05710 | Not Available | Negative | 1315219 - 1315461 | 8722.22 |
| methyl-accepting chemotaxis protein | EL161_RS05715 | Not Available | Positive | 1315760 - 1317424 | 59835.4 |
| ribosome recycling factor family protein | EL161_RS05720 | Not Available | Negative | 1317605 - 1317994 | 14394.7 |
| duf3297 family protein | EL161_RS05730 | Not Available | Positive | 1318398 - 1318643 | 9292.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

