Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine-specific ribonucleoside hydrolase riha | EL161_RS05630 | Not Available | Positive | 1296806 - 1297762 | 34258.5 |
| ribokinase | EL161_RS05635 | Not Available | Positive | 1297781 - 1298692 | 31813.9 |
| azurin | EL161_RS05640 | Not Available | Positive | 1298864 - 1299340 | 16377.6 |
| duf3622 domain-containing protein | EL161_RS05645 | Not Available | Negative | 1299489 - 1299794 | 11218.8 |
| glycerophosphodiester phosphodiesterase family protein | EL161_RS05650 | Not Available | Positive | 1300147 - 1301415 | 45989.3 |
| phosphoribosyltransferase | EL161_RS05655 | Not Available | Negative | 1301501 - 1302067 | 21351.5 |
| alkaline phosphatase d family protein | EL161_RS05660 | Not Available | Negative | 1302401 - 1304167 | 64690.1 |
| hpp family protein | EL161_RS05665 | Not Available | Positive | 1304438 - 1304863 | 15557.1 |
| duf4274 domain-containing protein | EL161_RS05670 | Not Available | Positive | 1304947 - 1305549 | 22921.2 |
| mate family efflux transporter | EL161_RS05675 | Not Available | Negative | 1305594 - 1306964 | 49606.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

