Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | EL161_RS05530 | Not Available | Negative | 1266105 - 1267316 | 43613.1 |
| alpha/beta hydrolase family esterase | EL161_RS05535 | Not Available | Positive | 1267668 - 1268594 | 33027.2 |
| tonb-dependent receptor | EL161_RS05540 | Not Available | Positive | 1268787 - 1271063 | 83853.9 |
| response regulator transcription factor | EL161_RS05545 | Not Available | Positive | 1271195 - 1271866 | 24621.6 |
| pas domain-containing hybrid sensor histidine kinase/response regulator | EL161_RS05550 | Not Available | Negative | 1271969 - 1275496 | 129584.0 |
| cynx/nimt family mfs transporter | EL161_RS05555 | Not Available | Positive | 1275642 - 1276817 | 42855.2 |
| alpha/beta hydrolase | EL161_RS05560 | Not Available | Positive | 1276820 - 1277809 | 36223.1 |
| amidase | EL161_RS05565 | Not Available | Negative | 1277988 - 1279694 | 60931.2 |
| agmatine deiminase | EL161_RS05570 | Not Available | Negative | 1279772 - 1280884 | 40708.0 |
| phb depolymerase family esterase | EL161_RS05575 | Not Available | Negative | 1281269 - 1283320 | 70484.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

