Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EL161_RS05480 | Not Available | Positive | 1255817 - 1256002 | 7258.8 |
| yggl family protein | EL161_RS05485 | Not Available | Positive | 1256011 - 1256343 | 12512.5 |
| aminotransferase class iv family protein | EL161_RS05490 | Not Available | Negative | 1256580 - 1257395 | 30216.3 |
| merr family transcriptional regulator | EL161_RS05495 | Not Available | Positive | 1257476 - 1257829 | 13552.6 |
| hypothetical protein | EL161_RS05500 | Not Available | Positive | 1258003 - 1258401 | 14923.4 |
| duf342 domain-containing protein | EL161_RS05505 | Not Available | Positive | 1258986 - 1260677 | 62006.8 |
| duf4144 domain-containing protein | EL161_RS05510 | Not Available | Positive | 1260916 - 1261293 | 14304.3 |
| site-2 protease family protein | EL161_RS05515 | Not Available | Positive | 1261483 - 1262607 | 41554.2 |
| efflux transporter outer membrane subunit | EL161_RS05520 | Not Available | Negative | 1262694 - 1264127 | 52295.3 |
| macb family efflux pump subunit | EL161_RS05525 | Not Available | Negative | 1264132 - 1266102 | 70594.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

