Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EL161_RS05430 | Not Available | Positive | 1244679 - 1245590 | 33437.5 |
| is3 family transposase | EL161_RS05435 | Not Available | Positive | 1245761 - 1246989 | 47163.4 |
| oxa-48 family class d beta-lactamase | EL161_RS05440 | Not Available | Negative | 1247195 - 1247992 | 30437.5 |
| hypothetical protein | EL161_RS05445 | Not Available | Positive | 1248363 - 1249520 | 42470.2 |
| sprt family zinc-dependent metalloprotease | EL161_RS05450 | Not Available | Positive | 1249701 - 1250306 | 23212.2 |
| endonuclease enda | EL161_RS05455 | Not Available | Positive | 1250433 - 1251209 | 29287.8 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | EL161_RS05460 | Not Available | Positive | 1251218 - 1251949 | 26626.1 |
| glutathione synthase | EL161_RS05465 | Not Available | Positive | 1252035 - 1252982 | 34923.4 |
| alkaline phosphatase | EL161_RS05470 | Not Available | Positive | 1253056 - 1254450 | 49570.5 |
| methyltransferase | EL161_RS05475 | Not Available | Positive | 1254638 - 1255666 | 37016.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

