Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EL161_RS00370 | Not Available | Positive | 79447 - 79620 | 6536.83 |
| hypothetical protein | EL161_RS00375 | Not Available | Positive | 79898 - 80158 | 9779.16 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | EL161_RS00380 | Not Available | Negative | 80162 - 81109 | 35460.2 |
| yccf domain-containing protein | EL161_RS00385 | Not Available | Positive | 81394 - 81801 | 14857.9 |
| alpha/beta fold hydrolase | EL161_RS00390 | Not Available | Negative | 81864 - 82733 | 33047.5 |
| m14 family metallopeptidase | EL161_RS00395 | Not Available | Negative | 82733 - 83758 | 39588.8 |
| substrate-binding periplasmic protein | EL161_RS00400 | Not Available | Negative | 83865 - 84617 | 28360.1 |
| pgpgw domain-containing protein | EL161_RS00405 | Not Available | Positive | 84882 - 85148 | 10051.7 |
| amp-binding protein | EL161_RS00410 | Not Available | Negative | 85379 - 87091 | 63848.8 |
| duf6508 domain-containing protein | EL161_RS00415 | Not Available | Negative | 87220 - 87600 | 14641.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

