Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | EL161_RS05330 | Not Available | Negative | 1213422 - 1218725 | 197722.0 |
| alanine/glycine:cation symporter family protein | EL161_RS05335 | Not Available | Negative | 1218855 - 1220213 | 47756.4 |
| abc transporter atp-binding protein | EL161_RS05340 | Not Available | Positive | 1220859 - 1221530 | 24575.2 |
| abc transporter permease | EL161_RS05345 | Not Available | Positive | 1221535 - 1224198 | 97774.5 |
| lipocalin-like domain-containing protein | EL161_RS05350 | Not Available | Positive | 1224195 - 1225445 | 46583.3 |
| type iv pilin protein | EL161_RS05355 | Not Available | Positive | 1225676 - 1226047 | 13519.1 |
| gsph/fimt family pseudopilin | EL161_RS05360 | Not Available | Positive | 1226049 - 1226483 | 15553.6 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EL161_RS05365 | Not Available | Positive | 1226483 - 1226881 | 14846.7 |
| pilw family protein | EL161_RS05370 | Not Available | Positive | 1226884 - 1227426 | 19316.3 |
| collagen-binding domain-containing protein | EL161_RS05375 | Not Available | Positive | 1227442 - 1229067 | 55969.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

