Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | EL161_RS05280 | Not Available | Positive | 1201400 - 1202245 | 30313.6 |
| duf4124 domain-containing protein | EL161_RS05285 | Not Available | Positive | 1202535 - 1203056 | 20106.8 |
| s8 family serine peptidase | EL161_RS05290 | Not Available | Negative | 1203118 - 1205625 | 86482.5 |
| curlin | EL161_RS05295 | Not Available | Positive | 1206027 - 1206446 | 14644.3 |
| curlin | EL161_RS05300 | Not Available | Positive | 1206461 - 1207969 | 52579.7 |
| helix-turn-helix transcriptional regulator | EL161_RS05305 | Not Available | Negative | 1208154 - 1208819 | 25086.8 |
| duf2238 domain-containing protein | EL161_RS05310 | Not Available | Negative | 1209194 - 1209802 | 22623.8 |
| phosphoglycerate dehydrogenase | EL161_RS05315 | Not Available | Positive | 1209958 - 1211187 | 44348.7 |
| pp_01032 | EL161_RS05320 | Not Available | Positive | 1211325 - 1212281 | Not Available |
| two-component system response regulator | EL161_RS05325 | Not Available | Negative | 1212341 - 1213357 | 37769.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

