Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | EL161_RS04980 | Not Available | Positive | 1139046 - 1139867 | 28553.0 |
| hypothetical protein | EL161_RS04985 | Not Available | Positive | 1139878 - 1140402 | 18960.1 |
| hypothetical protein | EL161_RS04990 | Not Available | Negative | 1140470 - 1141018 | 20685.2 |
| winged helix-turn-helix domain-containing protein | EL161_RS04995 | Not Available | Negative | 1141011 - 1141760 | 27965.0 |
| sodium:proton antiporter nhad | EL161_RS05000 | Not Available | Negative | 1141927 - 1143396 | 53504.5 |
| ydiy family protein | EL161_RS05005 | Not Available | Negative | 1143637 - 1144374 | 27035.4 |
| class ii fructose-bisphosphate aldolase | EL161_RS05010 | Not Available | Negative | 1144515 - 1145582 | 38513.0 |
| phosphoglycerate kinase | EL161_RS05015 | Not Available | Negative | 1145782 - 1146957 | 40664.7 |
| erythrose-4-phosphate dehydrogenase | EL161_RS05020 | Not Available | Negative | 1147091 - 1148107 | 37244.8 |
| transketolase | EL161_RS05025 | Not Available | Negative | 1148236 - 1150230 | 71640.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

