Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | EL161_RS04930 | Not Available | Negative | 1121920 - 1122915 | 36921.6 |
| mhyt domain-containing protein | EL161_RS04935 | Not Available | Negative | 1122918 - 1126271 | 123212.0 |
| atp-dependent rna helicase srmb | EL161_RS04940 | Not Available | Positive | 1126672 - 1127934 | 46869.2 |
| efflux rnd transporter periplasmic adaptor subunit | EL161_RS04945 | Not Available | Positive | 1128189 - 1129406 | 44466.8 |
| efflux rnd transporter permease subunit | EL161_RS04950 | Not Available | Positive | 1129406 - 1132609 | 118705.0 |
| tatd family nuclease-associated radical sam protein | EL161_RS04955 | Not Available | Positive | 1132797 - 1133501 | 25678.8 |
| pas domain-containing protein | EL161_RS04960 | Not Available | Positive | 1133635 - 1135869 | 83474.2 |
| hypothetical protein | EL161_RS04965 | Not Available | Negative | 1135853 - 1137250 | 54303.4 |
| hypothetical protein | EL161_RS04970 | Not Available | Negative | 1137335 - 1137865 | 19917.8 |
| winged helix-turn-helix domain-containing protein | EL161_RS04975 | Not Available | Negative | 1137858 - 1138601 | 28014.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

