Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | EL161_RS00320 | Not Available | Negative | 70008 - 71236 | 47102.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EL161_RS00325 | Not Available | Negative | 71385 - 71873 | 17745.0 |
| lytic murein transglycosylase | EL161_RS00330 | Not Available | Negative | 72082 - 73374 | 47157.9 |
| duf2750 domain-containing protein | EL161_RS00335 | Not Available | Positive | 73781 - 74140 | 13445.4 |
| hypothetical protein | EL161_RS00340 | Not Available | Positive | 74198 - 74839 | 24570.6 |
| chemotaxis protein chev | EL161_RS00345 | Not Available | Negative | 75025 - 75969 | 35147.9 |
| class i sam-dependent methyltransferase | EL161_RS00350 | Not Available | Negative | 76171 - 76785 | 23177.2 |
| lon peptidase substrate-binding domain-containing protein | EL161_RS00355 | Not Available | Positive | 76882 - 77439 | 21251.7 |
| sigma-70 family rna polymerase sigma factor | EL161_RS00360 | Not Available | Positive | 77556 - 78224 | 25291.4 |
| chrr family anti-sigma-e factor | EL161_RS00365 | Not Available | Positive | 78217 - 78912 | 25748.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

