Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 3770135 - 3770173 | Not Available |
| phage integrase central domain-containing protein | EL161_RS16730 | Not Available | - | 3777194 - 3777721 | 21103.6 |
| type ii toxin-antitoxin system pard family antitoxin | EL161_RS16735 | Not Available | + | 3777914 - 3778156 | 8708.4 |
| type ii toxin-antitoxin system rele/pare family toxin | EL161_RS16740 | Not Available | + | 3778149 - 3778448 | 11889.3 |
| abrb/maze/spovt family dna-binding domain-containing protein | EL161_RS16745 | Not Available | + | 3778684 - 3778974 | 10285.4 |
| Transcriptional regulator | EL161_RS16750 | Not Available | + | 3778974 - 3779303 | 12059.6 |
| helix-turn-helix domain-containing protein | EL161_RS16755 | Not Available | + | 3779433 - 3779782 | 12374.1 |
| Transposase isec46, is605 family | EL161_RS16760 | Not Available | - | 3779811 - 3780038 | 8613.66 |
| helix-turn-helix domain-containing protein | EL161_RS16765 | Not Available | + | 3780261 - 3780566 | 11356.1 |
| type ii toxin-antitoxin system hipa family toxin | EL161_RS16770 | Not Available | + | 3780563 - 3781813 | 47287.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
