Chromobacterium violaceum strain NCTC9695

Gram-negativeCocciMotileFacultatively anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Chromobacteriaceae

Genus

Chromobacterium

Description

Chromobacterium violaceum strain NCTC9695 is a Gram-negative, facultatively anaerobic bacterium characterized by its cocci shape and mobility, facilitated by the presence of flagella. This strain thrives optimally at a temperature of 25°C, placing it within the mesophilic temperature range. It possesses a single replicon and is enveloped by two membranes. C. violaceum is known to inhabit multiple environments, suggesting a versatile ecological niche. This strain is associated with a range of hosts, including Homo sapiens, Metazoa, and Galatea paradoxa. In humans, C. violaceum can have significant health implications, being linked to urinary tract infections, wound infections, septicemia, and skin infections. The presence of such infections underscores the bacterium's potential pathogenicity, particularly in immunocompromised individuals or those with underlying health conditions. The variety of infections it can cause indicates that C. violaceum has adapted mechanisms for survival and virulence in diverse biological contexts. Overall, the ecological versatility and pathogenic potential of Chromobacterium violaceum strain NCTC9695 highlight its significance in both environmental microbiology and clinical settings. Its ability to thrive in multiple habitats while impacting human health emphasizes the importance of understanding this organism's biology and ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyChromobacteriaceae
GenusChromobacterium
SpeciesChromobacterium violaceum
Strainstrain NCTC9695

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Chromobacterium violaceum strain NCTC9695
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultatively anaerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Galatea paradoxa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chromobacterium violaceum strain NCTC9695


Gene Summary

Adenine Count

827974 bp

Thymine Count

833142 bp

Guanine Count

1538590 bp

Cytosine Count

1533847 bp

Genome Length

4733553 bp

Protein-coding Genes

4729 genes

Non-Coding Genes

242 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEL155_RS02335Not AvailableNegative435301 - 43617327785.6
hypothetical proteinEL155_RS02340Not AvailablePositive436494 - 4367127984.3
hypothetical proteinEL155_RS02345Not AvailablePositive436721 - 43709813896.5
Hypothetical proteinEL155_RS02350Not AvailablePositive437014 - 43739713484.0
Baseplate wedge subunitEL155_RS02355Not AvailablePositive437600 - 43799214470.4
Baseplate proteinEL155_RS02360Not AvailablePositive438009 - 43917441784.8
Gp25, tail fiberEL155_RS02365Not AvailablePositive439167 - 43985926407.9
phage tail proteinEL155_RS02370Not AvailablePositive439879 - 44039218119.7
Hypothetical proteinEL155_RS02375Not AvailablePositive440709 - 44099310196.4
hypothetical proteinEL155_RS02380Not AvailablePositive441125 - 44144811191.5

Displaying genes 51 – 60 of 4971 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

108 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 108 metabolites

Health Effects

Health ConditionRelationReference
SepticemiaCausesPMC13014981
Wound infectionsCausesPMC13014981
Skin infectionsCausesPMC13014981
Urinary tract infectionsCausesPMC13014981
Urinary tract infectionCausesPMC13014981
Infections in humansCausesPMC10149000

Displaying health effects 1 – 6 of 6 in total