Serratia rubidaea strain NCTC9419

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia rubidaea strain NCTC9419 is a Gram-negative, rod-shaped bacterium that is characterized by the presence of flagella, which contributes to its motility. This strain is part of the broader Serratia genus, known for its environmental versatility and ability to thrive in various habitats. The strain NCTC9419 has a single replicon, indicating a streamlined genomic organization. The genomic sequence of this strain is available under the accession number NZ_LR134155.1, providing a resource for further study of its genetic makeup, metabolic capabilities, and potential applications in biotechnology or medicine. Understanding the ecological role of Serratia rubidaea, particularly strain NCTC9419, can be significant. Members of the Serratia genus are often found in soil, water, and as part of the microbiota of plants and animals, contributing to nutrient cycling and ecological interactions. The motility conferred by its flagella can enhance its ability to colonize diverse environments and interact with other microorganisms, which may be critical for its survival and ecological function. Thus, Serratia rubidaea strain NCTC9419 exemplifies the adaptability of bacteria in different ecological niches, highlighting the importance of studying such strains for insights into microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia rubidaea
Strainstrain NCTC9419

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia rubidaea strain NCTC9419
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serratia rubidaea strain NCTC9419 chromosome 1, complete sequence.

Gene Summary

Adenine Count

1073953 bp

Thymine Count

1062193 bp

Guanine Count

1516506 bp

Cytosine Count

1519523 bp

Genome Length

5172175 bp

Protein-coding Genes

4698 genes

Non-Coding Genes

306 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1,2-phenylacetyl-coa epoxidase subunit paaeEL090_RS01080Not AvailablePositive220755 - 22181338707.2
2,3-dehydroadipyl-coa hydratase paafEL090_RS01085Not AvailablePositive221823 - 22259627698.5
cytochrome ubiquinol oxidase subunit iEL090_RS01090Not AvailablePositive222600 - 22339028771.8
3-hydroxyacyl-coa dehydrogenaseEL090_RS01095Not AvailablePositive223443 - 22492753500.9
hydroxyphenylacetyl-coa thioesterase paaiEL090_RS01100Not AvailablePositive224924 - 22536415803.9
cytochrome ubiquinol oxidase subunit iEL090_RS01105Not AvailablePositive225361 - 22656541511.9
phenylacetate--coa ligase paakEL090_RS01110Not AvailablePositive226582 - 22788948502.1
phenylacetic acid degradation operon negative regulatory protein paaxEL090_RS01115Not AvailablePositive227981 - 22892235705.8
cytochrome ubiquinol oxidase subunit iEL090_RS01120Not AvailablePositive228933 - 22953021096.4
putative t6ss immunity periplasmic lipoproteinEL090_RS01125Not AvailableNegative229563 - 22997014787.8

Displaying genes 441 – 450 of 5004 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.