Salmonella bongori strain NCTC12419

RodMotilefacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella bongori strain NCTC12419 is a gram-negative, rod-shaped bacterium that is classified as a chemoorganotroph, utilizing organic compounds as its energy source. This strain is facultatively anaerobic, allowing it to thrive in both oxygen-rich and oxygen-poor environments. It is found in deep offshore waters of Lake Victoria, a fresh water ecosystem, where it exists as a free-living organism. The cellular arrangement of S. bongori NCTC12419 typically includes singles and pairs, and it possesses flagella, contributing to its mobility. This strain operates within a mesophilic temperature range, indicating its preference for moderate temperatures. Notably, it has two replicons, which are essential for its genetic stability and adaptability. S. bongori has a diverse range of hosts, including Homo sapiens, various metazoan organisms, Triticum aestivum (wheat), and Lates niloticus (Nile perch). In humans, it is associated with salmonellosis, a common foodborne illness. The presence of this bacterium in seafood from Lake Victoria raises concerns about the potential for transmission of pathogens through aquatic food sources. Given its ecological niche and ability to inhabit a range of hosts, S. bongori strain NCTC12419 exemplifies the complex interactions between aquatic ecosystems and human health. Its role in the food web, particularly in relation to seafood consumption, highlights the importance of monitoring microbial populations in freshwater environments to mitigate health risks associated with foodborne pathogens.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella bongori
Strainstrain NCTC12419

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Salmonella bongori strain NCTC12419
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
Habitatdeep offshore waters in Lake Victoria; Fresh water; Lake Victoria; seafood
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Triticum aestivum
Cell arrangementPairs- Singles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella bongori strain NCTC12419


Gene Summary

Adenine Count

1085539 bp

Thymine Count

1085208 bp

Guanine Count

1143870 bp

Cytosine Count

1145488 bp

Genome Length

4460105 bp

Protein-coding Genes

4017 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Dna invertaseSBG_RS03965P03014Positive853798 - 85435220059.9
Tail sheath monomerSBG_RS03970P22501Positive854436 - 8546407087.43
Major tail tube proteinSBG_RS03975P22502Positive854681 - 8548877393.77
Tail assembly proteinSBG_RS03980O64313Positive854942 - 85524410782.5
Gpe familygtail proteinSBG_RS03985Not AvailablePositive855259 - 8553784382.21
P2 gpt-like tail proteinSBG_RS03990Not AvailablePositive855371 - 858339108159.0
P2 gpu-like tail proteinSBG_RS03995Not AvailablePositive858347 - 85883217844.7
Tail proteinSBG_RS04000P10312Positive858829 - 85988139078.3
Hypothetical proteinSBG_RS04005P08762Positive859972 - 8601908056.65
AttrNot AvailableNot AvailablePositive860266 - 860281Not Available

Displaying genes 11 – 20 of 5207 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

99 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 99 metabolites

Health Effects

Health ConditionRelationReference
SalmonellosisCausesPMC8913728

Displaying health effects 1 – 1 of 1 in total