Raoultella terrigena strain NCTC13098

Rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Raoultella terrigena strain NCTC13098 is a Gram-negative, facultative anaerobic bacterium characterized by its rod shape and the presence of flagella. This strain has been identified in various habitats, including fresh water, milk, plants, and soil, indicating its versatility and environmental adaptability. The strain is known to have a single replicon and has been associated with hosts such as Homo sapiens and Nematoda. In humans, Raoultella terrigena is recognized as an opportunistic pathogen, linked to several health concerns, including urinary tract infections, sepsis, and subdural abscesses. Its ability to cause opportunistic infections highlights its potential risk in immunocompromised individuals. The presence of Raoultella terrigena in diverse environments suggests its ecological significance, particularly in fresh water and soil ecosystems where it may play a role in nutrient cycling. Its association with both human health and environmental habitats emphasizes the importance of monitoring this bacterium, particularly in the context of public health and microbiological safety. The accession number for this strain is NZ_LR131271.1, which can be used for further genetic studies and analysis.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella terrigena
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Raoultella terrigena strain NCTC13098
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water; milk; plants; soil
Biotic relationshipNot Available
Host(s)Homo sapiens, Nematoda
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raoultella terrigena strain NCTC13098 chromosome 1.

Gene Summary

Adenine Count

1303232 bp

Thymine Count

1302256 bp

Guanine Count

1736546 bp

Cytosine Count

1731917 bp

Genome Length

6073951 bp

Protein-coding Genes

5593 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative acyl-coa thioester hydrolaseELY08_RS21335Not AvailablePositive4360930 - 436221345464.0
tetratricopeptide repeat proteinELY08_RS21340Not AvailablePositive4362429 - 436298020109.7
sigma-70 family rna polymerase sigma factorELY08_RS21345Not AvailablePositive4362967 - 436351820824.9
anti-sigma factor family proteinELY08_RS21350Not AvailablePositive4363515 - 436431829729.2
6-phosphogluconolactonaseELY08_RS21355Not AvailableNegative4364389 - 436538435925.4
pyridoxal phosphataseELY08_RS21360Not AvailablePositive4365558 - 436637629793.5
molybdenum abc transporter atp-binding protein modcELY08_RS21365Not AvailableNegative4366377 - 436743539010.5
molybdate abc transporter permease subunitELY08_RS21370Not AvailableNegative4367438 - 436812724949.4
molybdate abc transporter substrate-binding proteinELY08_RS21375Not AvailableNegative4368124 - 436890027428.7
acrz family multidrug efflux pump-associated proteinELY08_RS21380Not AvailableNegative4369054 - 43692035387.92

Displaying genes 4231 – 4240 of 5846 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003491(2S)-2-acetolactateC5H7O4Chemical structure of (2S)-2-acetolactateNot available
Average131.108Da
Monoisotopic131.0349823Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da

Displaying 1–5 of 5 metabolites

Health Effects

Health ConditionRelationReference
Opportunistic disease in humansCausesPMC6606901
Opportunistic human infectionsCausesPMC6606901
SepsisCausesPMC6717099
Urinary tract infectionCausesPMC6717099
Subdural abscessCausesPMC6717099

Displaying health effects 1 – 5 of 5 in total