Raoultella terrigena strain NCTC13098

Rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Raoultella terrigena strain NCTC13098 is a Gram-negative, facultative anaerobic bacterium characterized by its rod shape and the presence of flagella. This strain has been identified in various habitats, including fresh water, milk, plants, and soil, indicating its versatility and environmental adaptability. The strain is known to have a single replicon and has been associated with hosts such as Homo sapiens and Nematoda. In humans, Raoultella terrigena is recognized as an opportunistic pathogen, linked to several health concerns, including urinary tract infections, sepsis, and subdural abscesses. Its ability to cause opportunistic infections highlights its potential risk in immunocompromised individuals. The presence of Raoultella terrigena in diverse environments suggests its ecological significance, particularly in fresh water and soil ecosystems where it may play a role in nutrient cycling. Its association with both human health and environmental habitats emphasizes the importance of monitoring this bacterium, particularly in the context of public health and microbiological safety. The accession number for this strain is NZ_LR131271.1, which can be used for further genetic studies and analysis.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella terrigena
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Raoultella terrigena strain NCTC13098
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water; milk; plants; soil
Biotic relationshipNot Available
Host(s)Homo sapiens, Nematoda
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raoultella terrigena strain NCTC13098


Gene Summary

Adenine Count

1303232 bp

Thymine Count

1302256 bp

Guanine Count

1736546 bp

Cytosine Count

1731917 bp

Genome Length

6073951 bp

Protein-coding Genes

5593 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Late control d family proteinELY08_RS09295Not AvailablePositive1887778 - 188893542457.1
Dna-binding transcriptional regulatorELY08_RS09300Not AvailablePositive1889020 - 18892418399.88
AttrNot AvailableNot AvailablePositive1889341 - 1889362Not Available
trna 5-hydroxyuridine modification protein yegqELY08_RS09305Not AvailableNegative1889511 - 189087251194.1
hypothetical proteinELY08_RS09310Not AvailableNegative1891026 - 189144816326.6
Putative dna-binding response regulatorELY08_RS09315Not AvailableNegative1891840 - 189256227519.4
AttlNot AvailableNot AvailablePositive2342948 - 2342966Not Available
Hypothetical proteinELY08_RS11545Not AvailableNegative2343528 - 234400118028.4
Tyrosine-type recombinase/integraseELY08_RS11550Not AvailableNegative2344005 - 234497336813.2
Hypothetical proteinELY08_RS11555Not AvailableNegative2345038 - 234533410897.1

Displaying genes 41 – 50 of 5846 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003491(2S)-2-acetolactateC5H7O4Chemical structure of (2S)-2-acetolactateNot available
Average131.108Da
Monoisotopic131.0349823Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da

Displaying 1–5 of 5 metabolites

Health Effects

Health ConditionRelationReference
Opportunistic disease in humansCausesPMC6606901
Opportunistic human infectionsCausesPMC6606901
SepsisCausesPMC6717099
Urinary tract infectionCausesPMC6717099
Subdural abscessCausesPMC6717099

Displaying health effects 1 – 5 of 5 in total