Helicobacter typhlonius strain MIT 97-6810

microaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter typhlonius strain MIT 97-6810 is a microaerophilic bacterium, indicating that it thrives in environments with reduced oxygen levels. This trait is crucial for its survival in specific ecological niches, particularly within the gastrointestinal tracts of certain hosts. The strain contains a single replicon, which is significant for understanding its genetic structure and replication mechanism. The strain is cataloged under the accession number NZ_LN907858.1, allowing for easy reference and retrieval of its genomic data for further research. The single replicon may suggest a streamlined genomic organization, potentially influencing its metabolic capabilities and adaptability within its ecological context. The microaerophilic nature of Helicobacter typhlonius strain MIT 97-6810 highlights its potential role in the microbiota of specific organisms, where it may contribute to digestion or interact with other microbial species. Understanding these traits provides insights into the ecological dynamics of gut microbiomes and the specific adaptations required for survival in oxygen-limited environments.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter typhlonius
Strainstrain MIT 97-6810

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter typhlonius strain MIT 97-6810
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter typhlonius strain MIT 97-6810 isolate 1 chromosome I,

Gene Summary

Adenine Count

585192 bp

Thymine Count

589302 bp

Guanine Count

368026 bp

Cytosine Count

378312 bp

Genome Length

1920832 bp

Protein-coding Genes

1933 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome maturation factor rimpBN2458_RS08000P59821Positive1606836 - 160730617253.7
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdBN2458_RS08005Q55158Positive1607254 - 160831539689.9
trna1(val) (adenine(37)-n6)-methyltransferaseBN2458_RS08010Q12R91Positive1608303 - 160906428578.7
hypothetical proteinBN2458_RS08015Not AvailablePositive1609095 - 161052255057.3
nfed family proteinBN2458_RS08020Not AvailableNegative1610683 - 161109615452.1
Trna-asnNot AvailableNot AvailablePositive1611314 - 1611388Not Available
hypothetical proteinBN2458_RS09995Not AvailablePositive1611462 - 16116567240.99
spfh domain-containing proteinBN2458_RS08030P9WPR8Positive1611669 - 161256833055.5
hypothetical proteinBN2458_RS08035Not AvailableNegative1613089 - 161345713924.8
alanine--trna ligaseBN2458_RS08040Q7VHV4Negative1613604 - 161627998281.2

Displaying genes 1661 – 1670 of 1980 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

127 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da

Displaying 1–10 of 127 metabolites

Health Effects

No health effects information available for this bacterium.