Candidatus Protochlamydia naegleriophila strain KNic

Gram-negative

Kingdom

Pseudomonadati

Phylum

Chlamydiota

Class

Chlamydiia

Order

Parachlamydiales

Family

Parachlamydiaceae

Genus

Candidatus Protochlamydia

Description

Candidatus Protochlamydia naegleriophila strain KNic is a Gram-negative bacterium characterized by its unique genomic structure, which comprises two replicons. This organism is noteworthy due to its association with the amoeba Naegleria, suggesting a potential ecological role in amoebic environments. The genomic data for this strain is accessible through the following accession numbers: NZ_LN879503.1 and NZ_LN879502.1. The presence of two replicons is significant, as it may indicate a complex evolutionary history or a specific adaptation mechanism to its niche. This trait can influence the bacterium's replication and genetic diversity, which are crucial for its survival and interaction with host organisms. The association with Naegleria may also imply that Candidatus Protochlamydia naegleriophila strain KNic could play a role in the microbial dynamics of freshwater ecosystems, potentially contributing to nutrient cycling or influencing the population dynamics of its amoebic host. Overall, the study of Candidatus Protochlamydia naegleriophila strain KNic offers insights into the interactions between bacteria and amoebae, highlighting the ecological significance of such relationships in freshwater environments. Further research may elucidate the specific functions and impacts of this bacterium within its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumChlamydiota
ClassChlamydiia
OrderParachlamydiales
FamilyParachlamydiaceae
GenusCandidatus Protochlamydia
SpeciesCandidatus Protochlamydia naegleriophila
Strainstrain KNic

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Protochlamydia naegleriophila strain KNic chromosome

Gene Summary

Adenine Count

823692 bp

Thymine Count

829377 bp

Guanine Count

616499 bp

Cytosine Count

615522 bp

Genome Length

2885090 bp

Protein-coding Genes

2388 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sycd/lcrh family type iii secretion system chaperonePNK_RS01750Not AvailableNegative441632 - 44220421859.4
hypothetical proteinPNK_RS01755Not AvailableNegative442353 - 44364847355.8
hypothetical proteinPNK_RS01760Not AvailableNegative443760 - 44520852116.3
hypothetical proteinPNK_RS01765Not AvailableNegative445388 - 44663545314.1
hypothetical proteinPNK_RS01770Not AvailableNegative446734 - 449676105907.0
gnat family n-acetyltransferasePNK_RS01775Not AvailablePositive450038 - 45098836902.4
gnat family n-acetyltransferasePNK_RS01780Not AvailableNegative451003 - 45192036301.0
atp-dependent clp protease atp-binding subunit clpxPNK_RS01785Not AvailableNegative452121 - 45336545800.5
atp-dependent clp protease proteolytic subunitPNK_RS01790Not AvailableNegative453788 - 45438121651.3
trigger factorPNK_RS12960Not AvailableNegative454705 - 45602150027.1

Displaying genes 351 – 360 of 2593 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.