Candidatus Protochlamydia naegleriophila strain KNic

Gram-negative

Kingdom

Pseudomonadati

Phylum

Chlamydiota

Class

Chlamydiia

Order

Parachlamydiales

Family

Parachlamydiaceae

Genus

Candidatus Protochlamydia

Description

Candidatus Protochlamydia naegleriophila strain KNic is a Gram-negative bacterium characterized by its unique genomic structure, which comprises two replicons. This organism is noteworthy due to its association with the amoeba Naegleria, suggesting a potential ecological role in amoebic environments. The genomic data for this strain is accessible through the following accession numbers: NZ_LN879503.1 and NZ_LN879502.1. The presence of two replicons is significant, as it may indicate a complex evolutionary history or a specific adaptation mechanism to its niche. This trait can influence the bacterium's replication and genetic diversity, which are crucial for its survival and interaction with host organisms. The association with Naegleria may also imply that Candidatus Protochlamydia naegleriophila strain KNic could play a role in the microbial dynamics of freshwater ecosystems, potentially contributing to nutrient cycling or influencing the population dynamics of its amoebic host. Overall, the study of Candidatus Protochlamydia naegleriophila strain KNic offers insights into the interactions between bacteria and amoebae, highlighting the ecological significance of such relationships in freshwater environments. Further research may elucidate the specific functions and impacts of this bacterium within its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumChlamydiota
ClassChlamydiia
OrderParachlamydiales
FamilyParachlamydiaceae
GenusCandidatus Protochlamydia
SpeciesCandidatus Protochlamydia naegleriophila
Strainstrain KNic

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Protochlamydia naegleriophila strain KNic chromosome

Gene Summary

Adenine Count

823692 bp

Thymine Count

829377 bp

Guanine Count

616499 bp

Cytosine Count

615522 bp

Genome Length

2885090 bp

Protein-coding Genes

2388 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amp-binding proteinPNK_RS10130Not AvailablePositive2381106 - 238269258195.2
hypothetical proteinPNK_RS10135Not AvailablePositive2383150 - 238353013432.8
lipoyl protein ligase domain-containing proteinPNK_RS10140Not AvailableNegative2383539 - 238425226371.1
hypothetical proteinPNK_RS10145Not AvailableNegative2384406 - 238513427840.4
ribonuclease iiiPNK_RS10150Not AvailablePositive2385352 - 238607127018.5
dna repair protein radaPNK_RS10155Not AvailablePositive2386085 - 238745550461.6
hydroxymethylbilane synthasePNK_RS10160Not AvailablePositive2387439 - 238814925825.2
uroporphyrinogen-iii synthasePNK_RS10165Not AvailablePositive2388136 - 238878323872.2
fe-mn family superoxide dismutasePNK_RS10170Not AvailablePositive2389023 - 238963722715.8
acetyl-coa carboxylase, carboxyltransferase subunit betaPNK_RS10175Not AvailablePositive2390042 - 239095033073.8

Displaying genes 2031 – 2040 of 2593 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.