Candidatus Protochlamydia naegleriophila strain KNic

Gram-negative

Kingdom

Pseudomonadati

Phylum

Chlamydiota

Class

Chlamydiia

Order

Parachlamydiales

Family

Parachlamydiaceae

Genus

Candidatus Protochlamydia

Description

Candidatus Protochlamydia naegleriophila strain KNic is a Gram-negative bacterium characterized by its unique genomic structure, which comprises two replicons. This organism is noteworthy due to its association with the amoeba Naegleria, suggesting a potential ecological role in amoebic environments. The genomic data for this strain is accessible through the following accession numbers: NZ_LN879503.1 and NZ_LN879502.1. The presence of two replicons is significant, as it may indicate a complex evolutionary history or a specific adaptation mechanism to its niche. This trait can influence the bacterium's replication and genetic diversity, which are crucial for its survival and interaction with host organisms. The association with Naegleria may also imply that Candidatus Protochlamydia naegleriophila strain KNic could play a role in the microbial dynamics of freshwater ecosystems, potentially contributing to nutrient cycling or influencing the population dynamics of its amoebic host. Overall, the study of Candidatus Protochlamydia naegleriophila strain KNic offers insights into the interactions between bacteria and amoebae, highlighting the ecological significance of such relationships in freshwater environments. Further research may elucidate the specific functions and impacts of this bacterium within its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumChlamydiota
ClassChlamydiia
OrderParachlamydiales
FamilyParachlamydiaceae
GenusCandidatus Protochlamydia
SpeciesCandidatus Protochlamydia naegleriophila
Strainstrain KNic

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Protochlamydia naegleriophila strain KNic chromosome

Gene Summary

Adenine Count

823692 bp

Thymine Count

829377 bp

Guanine Count

616499 bp

Cytosine Count

615522 bp

Genome Length

2885090 bp

Protein-coding Genes

2388 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinPNK_RS06695Not AvailableNegative1598772 - 159932620365.5
hypothetical proteinPNK_RS06700Not AvailableNegative1599405 - 160014828355.6
acetyl-coa carboxylase biotin carboxylase subunitPNK_RS06705Not AvailableNegative1600593 - 160195149396.6
acetyl-coa carboxylase biotin carboxyl carrier proteinPNK_RS06710Not AvailableNegative1601959 - 160246819049.0
duf924 family proteinPNK_RS06715Not AvailableNegative1602517 - 160334430681.8
elongation factor pPNK_RS06720Not AvailableNegative1603382 - 160393620591.0
ribulose-phosphate 3-epimerasePNK_RS06725Not AvailableNegative1604052 - 160478326540.8
branched-chain amino acid transport system ii carrier proteinPNK_RS06730Not AvailablePositive1605250 - 160637139909.6
branched-chain amino acid transport system ii carrier proteinPNK_RS06735Not AvailablePositive1606535 - 160771042504.0
hypothetical proteinPNK_RS06740Not AvailableNegative1607782 - 16079797589.85

Displaying genes 1341 – 1350 of 2593 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.