Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mind/para family protein | SD1D_RS04290 | Not Available | Positive | 931919 - 932800 | 32190.4 |
| flagellar brake protein | SD1D_RS04295 | Not Available | Positive | 932814 - 933575 | 30013.2 |
| chemotaxis-specific protein-glutamate methyltransferase cheb | SD1D_RS04300 | Not Available | Positive | 933614 - 934690 | 39282.4 |
| chemotaxis protein chea | SD1D_RS04305 | Not Available | Positive | 934692 - 936818 | 79231.6 |
| chemotaxis protein chew | SD1D_RS04310 | Not Available | Positive | 936850 - 937293 | 16744.1 |
| chemotaxis protein chec | SD1D_RS04315 | Not Available | Positive | 937317 - 937946 | 22655.8 |
| chemotaxis protein ched | SD1D_RS04320 | Not Available | Positive | 937955 - 938443 | 17603.8 |
| hypothetical protein | SD1D_RS04325 | Not Available | Positive | 938478 - 938771 | 11089.3 |
| flia/whig family rna polymerase sigma factor | SD1D_RS04330 | Not Available | Positive | 938870 - 939637 | 30014.0 |
| duf342 domain-containing protein | SD1D_RS04335 | Not Available | Positive | 939738 - 941342 | 59226.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
