Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor switch protein flim | SD1D_RS04240 | Not Available | Positive | 922464 - 923444 | 36544.2 |
| flagellar motor switch phosphatase fliy | SD1D_RS04245 | Not Available | Positive | 923451 - 924638 | 43643.0 |
| response regulator | SD1D_RS04250 | Not Available | Positive | 924667 - 925029 | 13159.5 |
| flagellar biosynthetic protein flio | SD1D_RS04255 | Not Available | Positive | 925035 - 925475 | 16779.8 |
| flagellar type iii secretion system pore protein flip | SD1D_RS04260 | Not Available | Positive | 925488 - 926339 | 31073.9 |
| flagellar biosynthesis protein fliq | SD1D_RS04265 | Not Available | Positive | 926367 - 926642 | 10233.1 |
| flagellar biosynthetic protein flir | SD1D_RS04270 | Not Available | Positive | 926639 - 927406 | 28635.6 |
| flagellar biosynthesis protein flhb | SD1D_RS04275 | Not Available | Positive | 927430 - 928563 | 43332.9 |
| flagellar biosynthesis protein flha | SD1D_RS04280 | Not Available | Positive | 928685 - 930718 | 74809.8 |
| flagellar biosynthesis protein flhf | SD1D_RS04285 | Not Available | Positive | 930718 - 931917 | 45389.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
