Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar export protein flij | SD1D_RS04190 | Not Available | Positive | 914368 - 914829 | 18653.5 |
| mote family protein | SD1D_RS04195 | Not Available | Positive | 914829 - 915590 | 28845.9 |
| flagellar hook-length control protein flik | SD1D_RS04200 | Not Available | Positive | 915682 - 917037 | 50799.5 |
| flagellar hook capping flgd n-terminal domain-containing protein | SD1D_RS04205 | Not Available | Positive | 917068 - 917904 | 30436.8 |
| tigr02530 family flagellar biosynthesis protein | SD1D_RS04210 | Not Available | Positive | 917922 - 918323 | 14599.6 |
| flagellar hook protein flge | SD1D_RS04215 | Not Available | Positive | 918409 - 919869 | 50816.9 |
| flagellar flbd family protein | SD1D_RS04220 | Not Available | Positive | 919964 - 920155 | 7300.09 |
| motility protein a | SD1D_RS04225 | Not Available | Positive | 920235 - 921035 | 28977.8 |
| flagellar motor protein motb | SD1D_RS04230 | Not Available | Positive | 921019 - 921837 | 30461.1 |
| hypothetical protein | SD1D_RS04235 | Not Available | Positive | 921866 - 922378 | 19449.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
