Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | SD1D_RS03830 | Not Available | Positive | 837254 - 838564 | 48138.0 |
| glycerophosphodiester phosphodiesterase family protein | SD1D_RS03835 | Not Available | Positive | 838617 - 839438 | 31802.2 |
| alpha/beta hydrolase | SD1D_RS03840 | Not Available | Positive | 839574 - 840491 | 35133.5 |
| lpxtg cell wall anchor domain-containing protein | SD1D_RS03845 | Not Available | Negative | 840574 - 841164 | 20608.3 |
| argininosuccinate synthase | SD1D_RS03850 | Not Available | Negative | 841290 - 842489 | 44346.3 |
| maf family protein | SD1D_RS03855 | Not Available | Positive | 842753 - 843358 | 22380.2 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | SD1D_RS03860 | Not Available | Positive | 843460 - 844680 | 43435.2 |
| acetylglutamate kinase | SD1D_RS03865 | Not Available | Positive | 844731 - 845624 | 32170.6 |
| aspartate aminotransferase family protein | SD1D_RS03870 | Not Available | Positive | 845674 - 846873 | 44059.5 |
| dmt family transporter | SD1D_RS03875 | Not Available | Positive | 847023 - 847457 | 15828.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
