Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix luporum |
| Strain | strain SD1D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845452 bp
Thymine Count
844048 bp
Guanine Count
458713 bp
Cytosine Count
461139 bp
Genome Length
2609352 bp
Protein-coding Genes
2309 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SD1D_RS03535 | Not Available | Negative | 772908 - 773984 | 40145.4 |
| helix-turn-helix domain-containing protein | SD1D_RS03540 | Not Available | Negative | 774014 - 774553 | 20195.0 |
| chorismate synthase | SD1D_RS03545 | Not Available | Negative | 774896 - 776002 | 39958.5 |
| hypothetical protein | SD1D_RS03550 | Not Available | Positive | 776168 - 776392 | 9028.44 |
| hypothetical protein | SD1D_RS03555 | Not Available | Positive | 776599 - 777207 | 23942.6 |
| hypothetical protein | SD1D_RS03560 | Not Available | Positive | 777233 - 777856 | 24001.8 |
| hypothetical protein | SD1D_RS03565 | Not Available | Negative | 778031 - 778252 | 7615.38 |
| s8 family peptidase | SD1D_RS03570 | Not Available | Positive | 778650 - 779606 | 34255.2 |
| glycosyltransferase | SD1D_RS03575 | Not Available | Positive | 779680 - 780759 | 41766.9 |
| glycosyltransferase | SD1D_RS03580 | Not Available | Positive | 780815 - 781810 | 39207.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
